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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs10243523 chr7:64517149 C/G INTS4L1 chr7:64601603-64694600:+ 0.7 5.19 3.52E-6 Box Plot
ACC rs10252925 chr7:64544767 T/C INTS4L1 chr7:64601603-64694600:+ 0.7 5.19 3.52E-6 Box Plot
ACC rs10257262 chr7:64957539 T/A INTS4L1 chr7:64601603-64694600:+ 0.67 5.05 5.79E-6 Box Plot
ACC rs10261314 chr7:76023029 T/C UPK3B chr7:76139745-76145838:+ 0.73 5.79 4.11E-7 Box Plot
ACC rs10262381 chr7:64946076 G/A INTS4L1 chr7:64601603-64694600:+ 0.67 5.04 6.01E-6 Box Plot
ACC rs10272849 chr7:64957126 A/G INTS4L1 chr7:64601603-64694600:+ 0.67 5.05 5.79E-6 Box Plot
ACC rs10274919 chr7:64956181 T/C INTS4L1 chr7:64601603-64694600:+ 0.7 5.42 1.55E-6 Box Plot
ACC rs10276164 chr7:64966197 C/G INTS4L1 chr7:64601603-64694600:+ 0.67 5.05 5.79E-6 Box Plot
ACC rs10280733 chr7:76309742 A/C POMZP3 chr7:76239303-76256578:- 0.97 5.93 2.47E-7 Box Plot
ACC rs10281089 chr7:76017997 C/T UPK3B chr7:76139745-76145838:+ 0.68 5.19 3.57E-6 Box Plot
ACC rs10283320 chr8:71858207 C/T XKR9 chr8:71581600-71702606:+ 0.68 6.95 6.06E-9 Box Plot
ACC rs10405039 chr19:42069171 T/G CEACAM21 chr19:42055886-42093197:+ 0.8 6.43 3.95E-8 Box Plot
ACC rs10420992 chr19:42064462 T/A CEACAM21 chr19:42055886-42093197:+ 0.71 5.46 1.34E-6 Box Plot
ACC rs10433405 chr3:93800273 G/A STX19 chr3:93733213-93747454:- 0.78 6.6 2.16E-8 Box Plot
ACC rs10445583 chr19:52882733 T/C ZNF880 chr19:52873170-52889048:+ 0.81 7.12 3.17E-9 Box Plot